Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | DWZ06_19645 | Not Available | Positive | 4656655 - 4658325 | 63540.8 |
| alpha-glucan family phosphorylase | DWZ06_19650 | Not Available | Positive | 4658354 - 4660918 | 98180.8 |
| hypothetical protein | DWZ06_19655 | Not Available | Positive | 4661582 - 4662154 | 21629.7 |
| hypothetical protein | DWZ06_19660 | Not Available | Positive | 4662200 - 4662538 | 12513.1 |
| hypothetical protein | DWZ06_19665 | Not Available | Positive | 4662543 - 4662983 | 16095.7 |
| hypothetical protein | DWZ06_19670 | Not Available | Positive | 4663012 - 4663293 | 10502.5 |
| hypothetical protein | DWZ06_19675 | Not Available | Positive | 4663335 - 4663679 | 13196.6 |
| hypothetical protein | DWZ06_19680 | Not Available | Negative | 4663674 - 4664084 | 14993.2 |
| hypothetical protein | DWZ06_19685 | Not Available | Negative | 4664153 - 4664428 | 10368.3 |
| hypothetical protein | DWZ06_19690 | Not Available | Negative | 4664450 - 4665427 | 35590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

