Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DWZ06_19595 | Not Available | Negative | 4646669 - 4647796 | 43347.1 |
| hypothetical protein | DWZ06_19600 | Not Available | Negative | 4648040 - 4648360 | 11696.2 |
| hypothetical protein | DWZ06_19605 | Not Available | Negative | 4648484 - 4648714 | 9173.52 |
| hypothetical protein | DWZ06_19610 | Not Available | Positive | 4648734 - 4649324 | 21754.7 |
| duf2764 domain-containing protein | DWZ06_19615 | Not Available | Positive | 4649334 - 4650170 | 32594.0 |
| v-type atp synthase subunit a | DWZ06_19620 | Not Available | Positive | 4650189 - 4651943 | 65785.3 |
| v-type atp synthase subunit b | DWZ06_19625 | Not Available | Positive | 4651979 - 4653301 | 48182.8 |
| v-type atp synthase subunit d | DWZ06_19630 | Not Available | Positive | 4653316 - 4653921 | 23447.8 |
| v-type atp synthase subunit i | DWZ06_19635 | Not Available | Positive | 4653918 - 4655723 | 67265.4 |
| v-type atp synthase subunit k | DWZ06_19640 | Not Available | Positive | 4655937 - 4656401 | 15421.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

