Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gggtgrt protein | DWZ06_19385 | Not Available | Positive | 4609241 - 4610251 | 35757.9 |
| duf4857 domain-containing protein | DWZ06_19390 | Not Available | Negative | 4610820 - 4611848 | 39445.4 |
| hypothetical protein | DWZ06_19395 | Not Available | Negative | 4611881 - 4612552 | 25594.6 |
| abc transporter atp-binding protein | DWZ06_19400 | Not Available | Negative | 4612576 - 4613463 | 33883.1 |
| peptidase | DWZ06_19405 | Not Available | Negative | 4613491 - 4614066 | 21616.7 |
| hypothetical protein | DWZ06_19410 | Not Available | Negative | 4614050 - 4614634 | 20936.8 |
| hypothetical protein | DWZ06_19415 | Not Available | Negative | 4614655 - 4616229 | 58494.8 |
| duf4876 domain-containing protein | DWZ06_19420 | Not Available | Negative | 4616244 - 4617458 | 44704.4 |
| tonb-dependent receptor | DWZ06_19425 | Not Available | Negative | 4617480 - 4620215 | 103961.0 |
| hypothetical protein | DWZ06_19430 | Not Available | Positive | 4620674 - 4620961 | 11068.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

