Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 | DWZ06_01880 | Not Available | Negative | 430137 - 430580 | 15797.5 |
| transcription termination/antitermination factor nusg | DWZ06_01885 | Not Available | Negative | 430641 - 431183 | 20140.3 |
| preprotein translocase subunit sece | DWZ06_01890 | Not Available | Negative | 431197 - 431391 | 7402.06 |
| Trna-trp | Not Available | Not Available | Positive | 431405 - 431480 | Not Available |
| elongation factor tu | DWZ06_01900 | Not Available | Negative | 431538 - 432722 | 43565.6 |
| Trna-thr | Not Available | Not Available | Positive | 432774 - 432845 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 432859 - 432931 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 432965 - 433047 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 433134 - 433210 | Not Available |
| ribosome-associated translation inhibitor raia | DWZ06_01925 | Not Available | Negative | 433309 - 433608 | 11325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

