Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | DWZ06_19170 | Not Available | Negative | 4558545 - 4559516 | 35430.3 |
| hypothetical protein | DWZ06_19175 | Not Available | Negative | 4559513 - 4560136 | 24012.9 |
| conjugal transfer protein trai | DWZ06_19185 | Not Available | Negative | 4560973 - 4561494 | 19646.1 |
| conjugal transfer protein | DWZ06_19190 | Not Available | Negative | 4561517 - 4562749 | 47731.9 |
| hypothetical protein | DWZ06_19195 | Not Available | Positive | 4562868 - 4563980 | 42497.4 |
| gtp-binding protein | DWZ06_19200 | Not Available | Negative | 4564094 - 4564696 | 23034.9 |
| sodium:solute symporter | DWZ06_19205 | Not Available | Negative | 4564662 - 4566143 | 55351.7 |
| recombination protein recr | DWZ06_19210 | Not Available | Positive | 4566222 - 4566839 | 22458.3 |
| hypothetical protein | DWZ06_19215 | Not Available | Positive | 4566860 - 4567330 | 17754.4 |
| n-acetyltransferase | DWZ06_19220 | Not Available | Positive | 4567327 - 4567863 | 20476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

