Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_18905 | Not Available | Positive | 4505025 - 4505741 | 27943.2 |
| universal stress protein | DWZ06_18915 | Not Available | Negative | 4507214 - 4508341 | 43112.8 |
| dna-binding protein | DWZ06_18920 | Not Available | Negative | 4508417 - 4508686 | 9982.98 |
| phosphatase pap2 family protein | DWZ06_18925 | Not Available | Negative | 4508816 - 4509523 | 26838.5 |
| tetratricopeptide repeat protein | DWZ06_18930 | Not Available | Negative | 4509534 - 4510352 | 30730.3 |
| protein batd | DWZ06_18935 | Not Available | Negative | 4510372 - 4512207 | 67647.8 |
| tetratricopeptide repeat protein | DWZ06_18940 | Not Available | Negative | 4512247 - 4512954 | 27631.4 |
| vwa domain-containing protein | DWZ06_18945 | Not Available | Negative | 4512964 - 4513986 | 37851.1 |
| vwa domain-containing protein | DWZ06_18950 | Not Available | Negative | 4513999 - 4514997 | 37254.6 |
| hypothetical protein | DWZ06_18955 | Not Available | Negative | 4515017 - 4516114 | 41517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

