Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_18850 | Not Available | Positive | 4490670 - 4491077 | 15397.9 |
| hypothetical protein | DWZ06_18855 | Not Available | Positive | 4491305 - 4491994 | 27536.3 |
| hypothetical protein | DWZ06_18860 | Not Available | Negative | 4492041 - 4492916 | 34211.8 |
| hypothetical protein | DWZ06_18865 | Not Available | Negative | 4492938 - 4494680 | 68359.3 |
| hypothetical protein | DWZ06_18870 | Not Available | Negative | 4495020 - 4496780 | 68215.0 |
| hypothetical protein | DWZ06_18880 | Not Available | Negative | 4499651 - 4500487 | 34157.2 |
| duf4065 domain-containing protein | DWZ06_18885 | Not Available | Positive | 4500862 - 4501419 | 21375.0 |
| duf4065 domain-containing protein | DWZ06_18890 | Not Available | Negative | 4501667 - 4502257 | 22637.2 |
| atp-binding protein | DWZ06_18895 | Not Available | Positive | 4502446 - 4503615 | 44927.4 |
| phosphoesterase | DWZ06_18900 | Not Available | Negative | 4504089 - 4504574 | 19060.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

