Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_18800 | Not Available | Positive | 4485150 - 4485623 | 18334.5 |
| mgmt family protein | DWZ06_18805 | Not Available | Negative | 4485573 - 4485926 | 13286.9 |
| nitrous oxide-stimulated promoter family protein | DWZ06_18810 | Not Available | Negative | 4485932 - 4486225 | 11961.9 |
| maoc family dehydratase | DWZ06_18815 | Not Available | Positive | 4486323 - 4486787 | 17703.5 |
| hypothetical protein | DWZ06_18820 | Not Available | Positive | 4486934 - 4487166 | 8853.49 |
| site-specific integrase | DWZ06_18825 | Not Available | Negative | 4487240 - 4487827 | 22673.8 |
| hypothetical protein | DWZ06_18830 | Not Available | Negative | 4488008 - 4488241 | 9274.06 |
| duf3871 family protein | DWZ06_18835 | Not Available | Negative | 4488241 - 4489257 | 38219.5 |
| hypothetical protein | DWZ06_18840 | Not Available | Positive | 4489901 - 4490290 | 15026.2 |
| hypothetical protein | DWZ06_18845 | Not Available | Positive | 4490287 - 4490679 | 15276.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

