Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s10 | DWZ06_01830 | Not Available | Negative | 415911 - 416216 | 11419.0 |
| elongation factor g | DWZ06_01835 | Not Available | Negative | 416302 - 418419 | 77460.5 |
| 30s ribosomal protein s7 | DWZ06_01840 | Not Available | Negative | 418451 - 418927 | 18204.1 |
| 30s ribosomal protein s12 | DWZ06_01845 | Not Available | Negative | 419076 - 419489 | 14994.4 |
| duf3467 domain-containing protein | DWZ06_01850 | Not Available | Negative | 419678 - 420019 | 12561.0 |
| dna-directed rna polymerase subunit beta' | DWZ06_01855 | Not Available | Negative | 420228 - 424514 | 158860.0 |
| dna-directed rna polymerase subunit beta | DWZ06_01860 | Not Available | Negative | 424553 - 428365 | 142493.0 |
| 50s ribosomal protein l7/l12 | DWZ06_01865 | Not Available | Negative | 428468 - 428842 | 12654.2 |
| 50s ribosomal protein l10 | DWZ06_01870 | Not Available | Negative | 428889 - 429407 | 18678.8 |
| 50s ribosomal protein l1 | DWZ06_01875 | Not Available | Negative | 429423 - 430121 | 24935.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

