Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | DWZ06_18370 | Not Available | Negative | 4388514 - 4389845 | 50252.4 |
| dutp diphosphatase | DWZ06_18375 | Not Available | Positive | 4390068 - 4390502 | 15780.1 |
| tetratricopeptide repeat protein | DWZ06_18380 | Not Available | Positive | 4390512 - 4392320 | 69691.2 |
| duf4292 domain-containing protein | DWZ06_18385 | Not Available | Positive | 4392317 - 4393150 | 31423.2 |
| peptidase m23 | DWZ06_18390 | Not Available | Positive | 4393150 - 4394484 | 50696.0 |
| hypothetical protein | DWZ06_18400 | Not Available | Negative | 4394656 - 4394865 | 8019.02 |
| rna-binding protein | DWZ06_18405 | Not Available | Positive | 4394986 - 4395357 | 13160.2 |
| hypothetical protein | DWZ06_18410 | Not Available | Negative | 4395873 - 4397603 | 67593.6 |
| hypothetical protein | DWZ06_18415 | Not Available | Negative | 4397600 - 4398031 | 17042.4 |
| hypothetical protein | DWZ06_18420 | Not Available | Negative | 4398100 - 4398687 | 22182.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

