Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s17 | DWZ06_01780 | Not Available | Negative | 411104 - 411361 | 9981.21 |
| 50s ribosomal protein l29 | DWZ06_01785 | Not Available | Negative | 411373 - 411567 | 7453.1 |
| 50s ribosomal protein l16 | DWZ06_01790 | Not Available | Negative | 411574 - 412008 | 16206.8 |
| 30s ribosomal protein s3 | DWZ06_01795 | Not Available | Negative | 412030 - 412761 | 27103.1 |
| 50s ribosomal protein l22 | DWZ06_01800 | Not Available | Negative | 412768 - 413178 | 15484.9 |
| 30s ribosomal protein s19 | DWZ06_01805 | Not Available | Negative | 413215 - 413484 | 9895.23 |
| 50s ribosomal protein l2 | DWZ06_01810 | Not Available | Negative | 413507 - 414328 | 29634.1 |
| 50s ribosomal protein l23 | DWZ06_01815 | Not Available | Negative | 414334 - 414624 | 10804.2 |
| 50s ribosomal protein l4 | DWZ06_01820 | Not Available | Negative | 414646 - 415272 | 23045.8 |
| 50s ribosomal protein l3 | DWZ06_01825 | Not Available | Negative | 415272 - 415889 | 21900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

