Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | DWZ06_18170 | Not Available | Positive | 4344272 - 4345111 | 30824.3 |
| hypothetical protein | DWZ06_18175 | Not Available | Negative | 4345103 - 4345837 | 27504.9 |
| lipid-a-disaccharide synthase | DWZ06_18180 | Not Available | Negative | 4345894 - 4347033 | 43067.6 |
| 5'/3'-nucleotidase sure | DWZ06_18185 | Not Available | Negative | 4347030 - 4347803 | 28322.7 |
| para family protein | DWZ06_18190 | Not Available | Positive | 4348061 - 4348828 | 28003.1 |
| parb/repb/spo0j family partition protein | DWZ06_18195 | Not Available | Positive | 4348832 - 4349728 | 33345.2 |
| hypothetical protein | DWZ06_18200 | Not Available | Positive | 4349798 - 4350505 | 26895.4 |
| lysm peptidoglycan-binding domain-containing protein | DWZ06_18205 | Not Available | Positive | 4350510 - 4351772 | 47706.3 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DWZ06_18210 | Not Available | Positive | 4351874 - 4354144 | 86308.9 |
| merr family transcriptional regulator | DWZ06_18215 | Not Available | Negative | 4354236 - 4354583 | 13742.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

