Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_17735 | Not Available | Negative | 4252922 - 4253335 | 16183.8 |
| alpha-galactosidase | DWZ06_17740 | Not Available | Positive | 4253536 - 4255143 | 60455.5 |
| luxr family transcriptional regulator | DWZ06_17745 | Not Available | Positive | 4255194 - 4255964 | 29413.5 |
| phosphoglycerate mutase family protein | DWZ06_17750 | Not Available | Negative | 4255982 - 4256566 | 22907.3 |
| mate family efflux transporter | DWZ06_17755 | Not Available | Negative | 4256681 - 4257973 | 48419.7 |
| hypothetical protein | DWZ06_17760 | Not Available | Negative | 4258188 - 4259027 | 32293.0 |
| leucyl/phenylalanyl-trna--protein transferase | DWZ06_17765 | Not Available | Negative | 4259168 - 4259821 | 24968.2 |
| aaa family atpase | DWZ06_17770 | Not Available | Negative | 4259917 - 4262145 | 83031.5 |
| atp-dependent clp protease adaptor clps | DWZ06_17775 | Not Available | Negative | 4262163 - 4262471 | 12034.5 |
| general stress protein | DWZ06_17780 | Not Available | Negative | 4262702 - 4263109 | 15299.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

