Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | DWZ06_01730 | Not Available | Negative | 406944 - 407390 | 15681.0 |
| 50s ribosomal protein l30 | DWZ06_01735 | Not Available | Negative | 407421 - 407597 | 6433.21 |
| 30s ribosomal protein s5 | DWZ06_01740 | Not Available | Negative | 407607 - 408125 | 17941.0 |
| 50s ribosomal protein l18 | DWZ06_01745 | Not Available | Negative | 408129 - 408470 | 12645.5 |
| 50s ribosomal protein l6 | DWZ06_01750 | Not Available | Negative | 408492 - 409061 | 20926.5 |
| 30s ribosomal protein s8 | DWZ06_01755 | Not Available | Negative | 409076 - 409471 | 14565.0 |
| 30s ribosomal protein s14 | DWZ06_01760 | Not Available | Negative | 409529 - 409828 | 11077.7 |
| 50s ribosomal protein l5 | DWZ06_01765 | Not Available | Negative | 409835 - 410392 | 20860.8 |
| 50s ribosomal protein l24 | DWZ06_01770 | Not Available | Negative | 410392 - 410715 | 11658.2 |
| 50s ribosomal protein l14 | DWZ06_01775 | Not Available | Negative | 410736 - 411101 | 13058.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

