Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DWZ06_17450 | Not Available | Negative | 4190946 - 4191887 | 36101.8 |
| sdr family oxidoreductase | DWZ06_17455 | Not Available | Negative | 4191930 - 4192805 | 33027.2 |
| gtra family protein | DWZ06_17460 | Not Available | Negative | 4192822 - 4193211 | 14958.9 |
| hsp20/alpha crystallin family protein | DWZ06_17465 | Not Available | Negative | 4193605 - 4194042 | 16951.0 |
| zn-dependent alcohol dehydrogenase | DWZ06_17470 | Not Available | Positive | 4194372 - 4195418 | 38371.3 |
| rna methyltransferase | DWZ06_17475 | Not Available | Positive | 4195454 - 4196260 | 29062.6 |
| duf3791 domain-containing protein | DWZ06_17485 | Not Available | Positive | 4198171 - 4198599 | 15717.1 |
| metallophosphatase | DWZ06_17490 | Not Available | Positive | 4199106 - 4199690 | 22597.9 |
| metallophosphatase | DWZ06_17495 | Not Available | Positive | 4199695 - 4200465 | 30100.7 |
| hypothetical protein | DWZ06_17500 | Not Available | Positive | 4200474 - 4201790 | 51340.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

