Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | DWZ06_17245 | Not Available | Negative | 4139718 - 4140335 | 23314.6 |
| atp-dependent dna helicase | DWZ06_17250 | Not Available | Positive | 4140444 - 4142834 | 91472.8 |
| carboxynorspermidine decarboxylase | DWZ06_17255 | Not Available | Positive | 4142867 - 4144030 | 44398.1 |
| Trna-gly | Not Available | Not Available | Positive | 4144204 - 4144276 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4144324 - 4144407 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4144471 - 4144557 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4144571 - 4144643 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4144691 - 4144774 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4144787 - 4144862 | Not Available |
| glutamine synthetase | DWZ06_17290 | Not Available | Negative | 4144983 - 4146485 | 56034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

