Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_17195 | Not Available | Positive | 4131316 - 4131669 | 12947.3 |
| glutathionylspermidine synthase family protein | DWZ06_17200 | Not Available | Positive | 4131682 - 4132806 | 43012.5 |
| hesa/moeb/thif family protein | DWZ06_17205 | Not Available | Negative | 4132919 - 4133653 | 27020.7 |
| 2-iminoacetate synthase thih | DWZ06_17210 | Not Available | Negative | 4133691 - 4134821 | 43251.8 |
| flavodoxin family protein | DWZ06_17215 | Not Available | Negative | 4134907 - 4135479 | 21329.5 |
| hypothetical protein | DWZ06_17220 | Not Available | Negative | 4135479 - 4135994 | 19574.8 |
| phosphomethylpyrimidine synthase thic | DWZ06_17225 | Not Available | Negative | 4136016 - 4137716 | 63475.9 |
| thiazole synthase | DWZ06_17230 | Not Available | Negative | 4137725 - 4138498 | 27519.5 |
| thiamine phosphate synthase | DWZ06_17235 | Not Available | Negative | 4138516 - 4139142 | 23065.1 |
| sulfur carrier protein this | DWZ06_17240 | Not Available | Negative | 4139132 - 4139332 | 7153.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

