Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wg repeat-containing protein | DWZ06_16975 | Not Available | Positive | 4083095 - 4084942 | 68550.7 |
| hypothetical protein | DWZ06_16980 | Not Available | Positive | 4084961 - 4086172 | 45890.6 |
| hypothetical protein | DWZ06_16985 | Not Available | Positive | 4086600 - 4086842 | 8901.08 |
| port family protein | DWZ06_16990 | Not Available | Positive | 4086858 - 4087634 | 29135.6 |
| acyltransferase | DWZ06_16995 | Not Available | Negative | 4088317 - 4089459 | 43799.9 |
| metallophosphoesterase | DWZ06_17000 | Not Available | Negative | 4089474 - 4090304 | 31429.9 |
| dha2 family efflux mfs transporter permease subunit | DWZ06_17005 | Not Available | Negative | 4090358 - 4091734 | 49031.6 |
| methionine adenosyltransferase | DWZ06_17010 | Not Available | Positive | 4092012 - 4093304 | 47598.8 |
| tigr00730 family rossman fold protein | DWZ06_17015 | Not Available | Positive | 4093419 - 4094006 | 21517.4 |
| duf4271 domain-containing protein | DWZ06_17020 | Not Available | Positive | 4094003 - 4094815 | 31597.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

