Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_16710 | Not Available | Positive | 4017011 - 4017475 | 16719.7 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ06_16720 | Not Available | Positive | 4020580 - 4022184 | 60673.2 |
| hypothetical protein | DWZ06_16725 | Not Available | Positive | 4022286 - 4022510 | 8488.53 |
| hypothetical protein | DWZ06_16730 | Not Available | Positive | 4022597 - 4023001 | 15466.8 |
| duf3440 domain-containing protein | DWZ06_16735 | Not Available | Positive | 4022998 - 4024278 | 51208.6 |
| chromosome partitioning protein parb | DWZ06_16740 | Not Available | Positive | 4024284 - 4024805 | 19977.2 |
| hypothetical protein | DWZ06_16745 | Not Available | Positive | 4024912 - 4025244 | 12583.5 |
| tonb-dependent receptor | DWZ06_16750 | Not Available | Positive | 4025342 - 4027678 | 87653.2 |
| hypothetical protein | DWZ06_16755 | Not Available | Positive | 4027720 - 4028736 | 38609.2 |
| atp-binding protein | DWZ06_16765 | Not Available | Positive | 4031091 - 4032401 | 49370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

