Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_15885 | Not Available | Negative | 3851903 - 3852118 | 8180.77 |
| hypothetical protein | DWZ06_15890 | Not Available | Negative | 3852196 - 3853008 | 30976.4 |
| nad(p)-dependent oxidoreductase | DWZ06_15895 | Not Available | Negative | 3853014 - 3854030 | 37972.1 |
| glycosyltransferase family 4 protein | DWZ06_15900 | Not Available | Negative | 3854037 - 3855152 | 42897.5 |
| glycosyltransferase | DWZ06_15905 | Not Available | Negative | 3855149 - 3856231 | 40950.9 |
| glycosyltransferase family 2 protein | DWZ06_15910 | Not Available | Negative | 3856228 - 3857169 | 36569.6 |
| hypothetical protein | DWZ06_15915 | Not Available | Negative | 3857156 - 3858367 | 47240.9 |
| alpha-1,2-fucosyltransferase | DWZ06_15920 | Not Available | Negative | 3858352 - 3859152 | 31966.7 |
| glycosyltransferase family 1 protein | DWZ06_15925 | Not Available | Negative | 3859176 - 3860351 | 45978.8 |
| sdr family oxidoreductase | DWZ06_15930 | Not Available | Negative | 3861180 - 3861902 | 26632.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

