Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2786 domain-containing protein | DWZ06_13885 | Not Available | Positive | 3339740 - 3340015 | 10100.1 |
| hypothetical protein | DWZ06_13890 | Not Available | Positive | 3340149 - 3340488 | 13032.6 |
| hypothetical protein | DWZ06_13895 | Not Available | Negative | 3340614 - 3341831 | 45934.8 |
| dna gyrase subunit a | DWZ06_13900 | Not Available | Negative | 3341862 - 3344429 | 96391.0 |
| atp-dependent clp protease atp-binding subunit | DWZ06_13905 | Not Available | Positive | 3344794 - 3347310 | 93935.9 |
| molecular chaperone htpg | DWZ06_13910 | Not Available | Positive | 3347445 - 3349490 | 78202.3 |
| patatin | DWZ06_13915 | Not Available | Positive | 3349620 - 3351929 | 87877.9 |
| Trna-arg | Not Available | Not Available | Positive | 3352019 - 3352095 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3352113 - 3352189 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3352207 - 3352283 | Not Available |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

