Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_01190 | Not Available | Negative | 276506 - 277384 | 33952.7 |
| flagellar protein flgn | DWZ06_01195 | Not Available | Negative | 277396 - 279240 | 70277.1 |
| hypothetical protein | DWZ06_01200 | Not Available | Negative | 279248 - 279712 | 17646.0 |
| hypothetical protein | DWZ06_01205 | Not Available | Negative | 279703 - 280101 | 15425.1 |
| hypothetical protein | DWZ06_01210 | Not Available | Negative | 280146 - 280544 | 15157.0 |
| hypothetical protein | DWZ06_01215 | Not Available | Negative | 280559 - 280852 | 11522.7 |
| sodium transporter | DWZ06_01220 | Not Available | Negative | 280862 - 281257 | 15665.7 |
| hypothetical protein | DWZ06_01225 | Not Available | Negative | 281241 - 282335 | 41149.2 |
| hypothetical protein | DWZ06_01230 | Not Available | Negative | 282342 - 282755 | 15202.4 |
| type vi secretion system needle protein hcp | DWZ06_01235 | Not Available | Negative | 282769 - 283191 | 15879.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

