Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_01140 | Not Available | Negative | 266877 - 267245 | 13892.8 |
| translation initiation factor 2 | DWZ06_01145 | Not Available | Negative | 267252 - 268154 | 34532.8 |
| duf1851 domain-containing protein | DWZ06_01150 | Not Available | Negative | 268179 - 268772 | 22933.5 |
| hypothetical protein | DWZ06_01155 | Not Available | Negative | 268780 - 269868 | 42382.6 |
| hypothetical protein | DWZ06_01160 | Not Available | Negative | 269893 - 272385 | 95565.6 |
| pkd domain-containing protein | DWZ06_01165 | Not Available | Negative | 272394 - 273299 | 34701.5 |
| hypothetical protein | DWZ06_01170 | Not Available | Negative | 273301 - 273816 | 20766.9 |
| type vi secretion system transmembrane protein tssq | DWZ06_01175 | Not Available | Negative | 273829 - 274332 | 19391.9 |
| hypothetical protein | DWZ06_01180 | Not Available | Negative | 274351 - 275313 | 36737.1 |
| hypothetical protein | DWZ06_01185 | Not Available | Negative | 275334 - 276494 | 44459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

