Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | DWZ06_01090 | Not Available | Negative | 259642 - 260091 | 17039.2 |
| para family protein | DWZ06_01095 | Not Available | Negative | 260099 - 260893 | 30006.4 |
| hypothetical protein | DWZ06_01100 | Not Available | Positive | 261060 - 261269 | 7560.13 |
| hypothetical protein | DWZ06_01105 | Not Available | Negative | 261332 - 261622 | 10436.3 |
| moba protein | DWZ06_01110 | Not Available | Positive | 261621 - 262043 | 16379.0 |
| mobilization protein | DWZ06_01115 | Not Available | Positive | 262028 - 263275 | 47215.1 |
| conjugal transfer protein trag | DWZ06_01120 | Not Available | Positive | 263312 - 265345 | 77195.1 |
| hypothetical protein | DWZ06_01125 | Not Available | Negative | 265431 - 265994 | 22162.3 |
| hypothetical protein | DWZ06_01130 | Not Available | Negative | 266005 - 266421 | 15885.5 |
| hypothetical protein | DWZ06_01135 | Not Available | Negative | 266441 - 266710 | 10224.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

