Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4141 domain-containing protein | DWZ06_01040 | Not Available | Negative | 251552 - 252181 | 23832.5 |
| duf3876 domain-containing protein | DWZ06_01045 | Not Available | Negative | 252178 - 252534 | 13252.0 |
| trag family conjugative transposon atpase | DWZ06_01050 | Not Available | Negative | 252531 - 255065 | 97781.5 |
| duf4133 domain-containing protein | DWZ06_01055 | Not Available | Negative | 255062 - 255388 | 12291.4 |
| duf4134 domain-containing protein | DWZ06_01060 | Not Available | Negative | 255394 - 255780 | 13706.8 |
| hypothetical protein | DWZ06_01065 | Not Available | Negative | 255882 - 256064 | 7402.18 |
| hypothetical protein | DWZ06_01070 | Not Available | Negative | 256107 - 256292 | 7098.15 |
| hypothetical protein | DWZ06_01075 | Not Available | Positive | 256337 - 257347 | 38656.2 |
| hypothetical protein | DWZ06_01080 | Not Available | Positive | 257380 - 258519 | 44574.9 |
| duf4122 domain-containing protein | DWZ06_01085 | Not Available | Negative | 258986 - 259654 | 25422.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

