Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_00990 | Not Available | Positive | 243549 - 244430 | 33284.0 |
| hypothetical protein | DWZ06_00995 | Not Available | Positive | 244459 - 245613 | 42486.3 |
| glycoside hydrolase | DWZ06_01000 | Not Available | Negative | 245682 - 246161 | 18657.0 |
| duf3872 domain-containing protein | DWZ06_01005 | Not Available | Negative | 246158 - 246619 | 17766.8 |
| conjugal transfer protein trao | DWZ06_01010 | Not Available | Negative | 246641 - 247228 | 21820.1 |
| conjugative transposon protein tran | DWZ06_01015 | Not Available | Negative | 247225 - 248139 | 34780.2 |
| conjugative transposon protein tram | DWZ06_01020 | Not Available | Negative | 248189 - 249496 | 47988.2 |
| duf3989 domain-containing protein | DWZ06_01025 | Not Available | Negative | 249447 - 249746 | 10933.5 |
| conjugative transposon protein trak | DWZ06_01030 | Not Available | Negative | 249743 - 250366 | 23968.5 |
| conjugative transposon protein traj | DWZ06_01035 | Not Available | Negative | 250536 - 251549 | 37339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

