Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | DWZ06_10185 | Not Available | Negative | 2461533 - 2462102 | 20885.2 |
| hypoxanthine phosphoribosyltransferase | DWZ06_10190 | Not Available | Negative | 2462143 - 2462679 | 20092.5 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DWZ06_10195 | Not Available | Positive | 2462799 - 2464334 | 56235.6 |
| duf4831 family protein | DWZ06_10200 | Not Available | Positive | 2464371 - 2465420 | 38672.6 |
| mfs transporter | DWZ06_10205 | Not Available | Negative | 2465502 - 2466890 | 51163.3 |
| duf3332 domain-containing protein | DWZ06_10210 | Not Available | Positive | 2467064 - 2467615 | 19885.5 |
| duf4934 domain-containing protein | DWZ06_10215 | Not Available | Positive | 2467696 - 2468928 | 46077.8 |
| tolc family protein | DWZ06_10220 | Not Available | Negative | 2469009 - 2470382 | 50317.8 |
| acrb/acrd/acrf family protein | DWZ06_10225 | Not Available | Negative | 2470379 - 2473594 | 117339.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWZ06_10230 | Not Available | Negative | 2473603 - 2474718 | 40051.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

