Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_00935 | Not Available | Positive | 236483 - 236692 | 7883.19 |
| molecular chaperone dnaj | DWZ06_00940 | Not Available | Positive | 236706 - 237725 | 39564.7 |
| hypothetical protein | DWZ06_00945 | Not Available | Positive | 237736 - 238437 | 27198.1 |
| hypothetical protein | DWZ06_00950 | Not Available | Positive | 238439 - 239149 | 27528.4 |
| hypothetical protein | DWZ06_00955 | Not Available | Negative | 239208 - 239552 | 13340.1 |
| duf4120 domain-containing protein | DWZ06_00960 | Not Available | Positive | 239883 - 240173 | 11179.1 |
| hypothetical protein | DWZ06_00970 | Not Available | Positive | 240455 - 240733 | 11173.2 |
| duf4121 family protein | DWZ06_00975 | Not Available | Positive | 240720 - 241541 | 32146.2 |
| sam-dependent dna methyltransferase | DWZ06_00980 | Not Available | Positive | 241528 - 242268 | 28510.6 |
| hypothetical protein | DWZ06_00985 | Not Available | Positive | 242301 - 243536 | 46885.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

