Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_09470 | Not Available | Negative | 2280568 - 2281722 | 45544.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | DWZ06_09475 | Not Available | Negative | 2281729 - 2283453 | 64978.9 |
| sdr family oxidoreductase | DWZ06_09480 | Not Available | Negative | 2283463 - 2284329 | 31066.9 |
| glycosyltransferase family 2 protein | DWZ06_09485 | Not Available | Negative | 2284326 - 2285249 | 36301.4 |
| hypothetical protein | DWZ06_09490 | Not Available | Negative | 2285246 - 2286751 | 57205.0 |
| transcriptional regulator | DWZ06_09495 | Not Available | Negative | 2286983 - 2287816 | 32255.6 |
| site-specific integrase | DWZ06_09500 | Not Available | Negative | 2288296 - 2289498 | 46810.9 |
| abc transporter atp-binding protein | DWZ06_09505 | Not Available | Negative | 2289582 - 2291447 | 72122.0 |
| duf3805 domain-containing protein | DWZ06_09510 | Not Available | Negative | 2291455 - 2292288 | 31663.2 |
| lactoylglutathione lyase | DWZ06_09515 | Not Available | Negative | 2292331 - 2292708 | 14724.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

