Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor | DWZ06_09420 | Not Available | Negative | 2269836 - 2270327 | 19166.0 |
| dna alkylation repair protein | DWZ06_09425 | Not Available | Negative | 2270358 - 2271026 | 25760.4 |
| dihydrofolate reductase | DWZ06_09430 | Not Available | Negative | 2271035 - 2273047 | 76580.1 |
| arac family transcriptional regulator | DWZ06_09435 | Not Available | Negative | 2273153 - 2273620 | 18149.8 |
| dna helicase recq | DWZ06_09440 | Not Available | Positive | 2273952 - 2275769 | 69143.1 |
| hypothetical protein | DWZ06_09445 | Not Available | Negative | 2275883 - 2276233 | 13501.0 |
| glycosyltransferase | DWZ06_09450 | Not Available | Negative | 2276223 - 2277425 | 45830.6 |
| glycosyltransferase | DWZ06_09455 | Not Available | Negative | 2277415 - 2278167 | 28913.4 |
| epsg family protein | DWZ06_09460 | Not Available | Negative | 2278184 - 2279272 | 42474.5 |
| glycosyltransferase | DWZ06_09465 | Not Available | Negative | 2279357 - 2280571 | 45963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

