Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 230306 - 230381 | Not Available |
| site-specific integrase | DWZ06_00890 | Not Available | Positive | 230843 - 232078 | 47036.0 |
| hypothetical protein | DWZ06_00895 | Not Available | Negative | 232159 - 232353 | 7300.03 |
| hypothetical protein | DWZ06_00900 | Not Available | Positive | 232381 - 232677 | 11165.2 |
| hypothetical protein | DWZ06_00905 | Not Available | Positive | 232662 - 233804 | 44555.4 |
| hypothetical protein | DWZ06_00910 | Not Available | Positive | 233808 - 234695 | 34762.8 |
| hypothetical protein | DWZ06_00915 | Not Available | Positive | 234765 - 235016 | 9432.45 |
| duf4313 domain-containing protein | DWZ06_00920 | Not Available | Positive | 235067 - 235564 | 19151.7 |
| hypothetical protein | DWZ06_00925 | Not Available | Positive | 235612 - 236211 | 22949.8 |
| hypothetical protein | DWZ06_00930 | Not Available | Positive | 236208 - 236507 | 11785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

