Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | DWZ06_09105 | Not Available | Positive | 2186044 - 2186637 | 23012.2 |
| Trna-trp | Not Available | Not Available | Positive | 2186705 - 2186780 | Not Available |
| radical sam protein | DWZ06_09115 | Not Available | Negative | 2186837 - 2187382 | 20479.5 |
| 6-carboxytetrahydropterin synthase qued | DWZ06_09120 | Not Available | Negative | 2187369 - 2187701 | 12835.3 |
| duf454 domain-containing protein | DWZ06_09125 | Not Available | Positive | 2187836 - 2188198 | 14082.9 |
| hypothetical protein | DWZ06_09130 | Not Available | Positive | 2188371 - 2188664 | 11779.2 |
| cell division protein zapa | DWZ06_09135 | Not Available | Positive | 2188694 - 2188987 | 11772.0 |
| ribonuclease y | DWZ06_09140 | Not Available | Positive | 2189088 - 2190623 | 57327.7 |
| hypothetical protein | DWZ06_09145 | Not Available | Positive | 2190815 - 2191615 | 30025.9 |
| patatin family protein | DWZ06_09150 | Not Available | Negative | 2191755 - 2192609 | 32936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

