Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_08640 | Not Available | Positive | 2046424 - 2048655 | 85680.7 |
| linear amide c-n hydrolase | DWZ06_08645 | Not Available | Positive | 2048869 - 2049948 | 39662.6 |
| Trna-lys | Not Available | Not Available | Positive | 2050120 - 2050195 | Not Available |
| magnesium and cobalt transport protein cora | DWZ06_08655 | Not Available | Positive | 2050427 - 2051467 | 40193.7 |
| lrp/asnc family transcriptional regulator | DWZ06_08660 | Not Available | Negative | 2051492 - 2051962 | 17952.8 |
| hypothetical protein | DWZ06_08665 | Not Available | Positive | 2052142 - 2052567 | 15949.3 |
| deda family protein | DWZ06_08670 | Not Available | Positive | 2052700 - 2053344 | 24501.6 |
| duf47 domain-containing protein | DWZ06_08675 | Not Available | Positive | 2053384 - 2054031 | 25154.2 |
| inorganic phosphate transporter | DWZ06_08680 | Not Available | Positive | 2054048 - 2055061 | 36114.1 |
| hypothetical protein | DWZ06_08685 | Not Available | Positive | 2055200 - 2055562 | 13832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

