Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWZ06_08115 | Not Available | Positive | 1905442 - 1906290 | 32984.3 |
| hypothetical protein | DWZ06_08120 | Not Available | Positive | 1906326 - 1906985 | 25622.4 |
| ompa family protein | DWZ06_08125 | Not Available | Positive | 1907128 - 1908264 | 41757.1 |
| hypothetical protein | DWZ06_08135 | Not Available | Negative | 1908854 - 1909258 | 15043.9 |
| dna polymerase iii subunit gamma/tau | DWZ06_08140 | Not Available | Negative | 1909460 - 1911271 | 67506.9 |
| septum formation initiator family protein | DWZ06_08145 | Not Available | Positive | 1911390 - 1911686 | 11882.5 |
| hypothetical protein | DWZ06_08150 | Not Available | Positive | 1911710 - 1912027 | 12033.2 |
| s46 family peptidase | DWZ06_08155 | Not Available | Negative | 1912145 - 1914331 | 82669.7 |
| s46 family peptidase | DWZ06_08160 | Not Available | Negative | 1914331 - 1916496 | 81216.0 |
| duf4369 domain-containing protein | DWZ06_08165 | Not Available | Positive | 1916711 - 1917388 | 25343.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

