Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1892647 - 1892737 | Not Available |
| hypothetical protein | DWZ06_08065 | Not Available | Negative | 1892966 - 1893418 | 16712.3 |
| hypothetical protein | DWZ06_08070 | Not Available | Negative | 1893426 - 1894463 | 39859.3 |
| duf3575 domain-containing protein | DWZ06_08080 | Not Available | Positive | 1895240 - 1895836 | 22725.4 |
| hypothetical protein | DWZ06_08085 | Not Available | Positive | 1895875 - 1897323 | 55110.2 |
| hypothetical protein | DWZ06_08090 | Not Available | Positive | 1897419 - 1898954 | 55937.5 |
| hypothetical protein | DWZ06_08095 | Not Available | Positive | 1899100 - 1900068 | 36648.5 |
| hypothetical protein | DWZ06_08100 | Not Available | Positive | 1900150 - 1901403 | 46212.1 |
| hypothetical protein | DWZ06_08105 | Not Available | Positive | 1901461 - 1905042 | 132288.0 |
| hypothetical protein | DWZ06_08110 | Not Available | Negative | 1905258 - 1905443 | 7365.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

