Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_06920 | Not Available | Negative | 1591276 - 1591494 | 7976.9 |
| hypothetical protein | DWZ06_06925 | Not Available | Negative | 1591699 - 1591947 | 9253.75 |
| hypothetical protein | DWZ06_06930 | Not Available | Positive | 1592127 - 1592774 | 24488.9 |
| hypothetical protein | DWZ06_06935 | Not Available | Positive | 1592787 - 1593284 | 18681.7 |
| glycosyl hydrolase family 88 | DWZ06_06940 | Not Available | Negative | 1593341 - 1594639 | 49915.8 |
| hypothetical protein | DWZ06_06945 | Not Available | Positive | 1594981 - 1595184 | 7696.4 |
| hypothetical protein | DWZ06_06950 | Not Available | Negative | 1595573 - 1596781 | 45466.2 |
| hypothetical protein | DWZ06_06955 | Not Available | Negative | 1596802 - 1597377 | 21797.8 |
| site-specific integrase | DWZ06_06960 | Not Available | Negative | 1598124 - 1598702 | 22212.5 |
| scai family restriction endonuclease | DWZ06_06965 | Not Available | Positive | 1598791 - 1599378 | 22261.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

