Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | DWZ06_06820 | Not Available | Positive | 1572456 - 1573742 | 48001.9 |
| hypothetical protein | DWZ06_06825 | Not Available | Positive | 1573765 - 1574148 | 15190.0 |
| asnc family transcriptional regulator | DWZ06_06830 | Not Available | Positive | 1574265 - 1574723 | 17087.9 |
| duf4491 family protein | DWZ06_06835 | Not Available | Positive | 1574730 - 1575044 | 12155.1 |
| hypothetical protein | DWZ06_06840 | Not Available | Negative | 1575244 - 1575687 | 17109.1 |
| hypothetical protein | DWZ06_06845 | Not Available | Positive | 1575713 - 1576441 | 28522.1 |
| hypothetical protein | DWZ06_06850 | Not Available | Positive | 1576384 - 1576692 | 12084.6 |
| helicase | DWZ06_06855 | Not Available | Positive | 1577423 - 1578673 | 48035.2 |
| butyrate kinase | DWZ06_06860 | Not Available | Negative | 1578811 - 1579875 | 38268.3 |
| phosphate butyryltransferase | DWZ06_06865 | Not Available | Negative | 1579888 - 1580796 | 33315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

