Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcfk-like protein | DWZ06_00570 | Not Available | Negative | 129075 - 129494 | 16155.0 |
| hypothetical protein | DWZ06_00575 | Not Available | Negative | 129518 - 129739 | 8927.74 |
| hypothetical protein | DWZ06_00580 | Not Available | Negative | 129751 - 129966 | 8116.46 |
| molybdenum abc transporter atp-binding protein | DWZ06_00585 | Not Available | Negative | 129974 - 130309 | 12959.5 |
| hypothetical protein | DWZ06_00595 | Not Available | Negative | 131026 - 131205 | 6531.03 |
| glycoside hydrolase family 28 protein | DWZ06_00605 | Not Available | Positive | 131590 - 132966 | 52330.3 |
| helix-turn-helix domain-containing protein | DWZ06_00610 | Not Available | Positive | 133176 - 135962 | 105982.0 |
| duf4982 domain-containing protein | DWZ06_00615 | Not Available | Positive | 136084 - 139062 | 113632.0 |
| glucuronyl hydrolase | DWZ06_00620 | Not Available | Positive | 139118 - 140308 | 45495.7 |
| duf2264 domain-containing protein | DWZ06_00625 | Not Available | Positive | 140298 - 141527 | 46619.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

