Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_06170 | Not Available | Negative | 1401783 - 1403420 | 59145.9 |
| hypothetical protein | DWZ06_06175 | Not Available | Negative | 1403440 - 1403697 | 10013.6 |
| arac family transcriptional regulator | DWZ06_06180 | Not Available | Negative | 1403861 - 1404988 | 43306.8 |
| hypothetical protein | DWZ06_06205 | Not Available | Positive | 1407850 - 1408077 | 8465.46 |
| prtrc system protein e | DWZ06_06210 | Not Available | Positive | 1408109 - 1409041 | 35033.2 |
| prtrc system protein c | DWZ06_06215 | Not Available | Positive | 1409047 - 1409268 | 8046.55 |
| hypothetical protein | DWZ06_06220 | Not Available | Positive | 1409309 - 1410388 | 41547.4 |
| prtrc system protein b | DWZ06_06225 | Not Available | Positive | 1410392 - 1411108 | 27438.0 |
| prtrc system thif family protein | DWZ06_06230 | Not Available | Positive | 1411105 - 1411893 | 29198.5 |
| arac family transcriptional regulator | DWZ06_06235 | Not Available | Positive | 1412003 - 1413130 | 43812.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

