Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3408 domain-containing protein | DWZ06_06055 | Not Available | Negative | 1383019 - 1383435 | 15859.8 |
| para family protein | DWZ06_06060 | Not Available | Negative | 1383441 - 1384193 | 28520.7 |
| hypothetical protein | DWZ06_06065 | Not Available | Positive | 1384572 - 1384832 | 10143.2 |
| moba protein | DWZ06_06070 | Not Available | Positive | 1384793 - 1385245 | 17734.5 |
| mobilization protein | DWZ06_06075 | Not Available | Positive | 1385247 - 1386500 | 47578.5 |
| conjugal transfer protein trag | DWZ06_06080 | Not Available | Positive | 1386534 - 1388561 | 77290.2 |
| hypothetical protein | DWZ06_06085 | Not Available | Positive | 1388777 - 1389040 | 10603.9 |
| hypothetical protein | DWZ06_06090 | Not Available | Positive | 1389052 - 1389312 | 10065.8 |
| hypothetical protein | DWZ06_06095 | Not Available | Positive | 1389318 - 1389815 | 19393.9 |
| duf4120 domain-containing protein | DWZ06_06100 | Not Available | Positive | 1389827 - 1390120 | 11207.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

