Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_05895 | Not Available | Positive | 1359698 - 1359928 | 9284.15 |
| hypothetical protein | DWZ06_05900 | Not Available | Positive | 1359939 - 1360535 | 23548.8 |
| hypothetical protein | DWZ06_05905 | Not Available | Positive | 1360547 - 1360756 | 8015.27 |
| molecular chaperone dnaj | DWZ06_05910 | Not Available | Positive | 1360767 - 1361837 | 41422.7 |
| hypothetical protein | DWZ06_05915 | Not Available | Positive | 1361834 - 1362151 | 12012.2 |
| port family protein | DWZ06_05920 | Not Available | Positive | 1362469 - 1363068 | 23233.9 |
| hypothetical protein | DWZ06_05925 | Not Available | Negative | 1363415 - 1363789 | 14644.2 |
| hypothetical protein | DWZ06_05930 | Not Available | Negative | 1363959 - 1364465 | 19961.7 |
| hypothetical protein | DWZ06_05935 | Not Available | Negative | 1364909 - 1365253 | 13304.0 |
| duf4120 domain-containing protein | DWZ06_05945 | Not Available | Positive | 1365589 - 1365879 | 11096.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

