Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_05425 | Not Available | Negative | 1263674 - 1264960 | 49366.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DWZ06_05430 | Not Available | Negative | 1264962 - 1265531 | 21852.8 |
| nad(p)-dependent oxidoreductase | DWZ06_05435 | Not Available | Negative | 1265542 - 1266450 | 33786.3 |
| cdp-glucose 4,6-dehydratase | DWZ06_05440 | Not Available | Negative | 1266438 - 1267496 | 40090.7 |
| glucose-1-phosphate cytidylyltransferase | DWZ06_05445 | Not Available | Negative | 1267499 - 1268308 | 30954.2 |
| hypothetical protein | DWZ06_05450 | Not Available | Negative | 1268318 - 1268674 | 13346.8 |
| gfo/idh/moca family oxidoreductase | DWZ06_05460 | Not Available | Negative | 1269412 - 1270347 | 34686.4 |
| dehydrogenase | DWZ06_05465 | Not Available | Negative | 1270364 - 1271317 | 35906.3 |
| nucleotidyltransferase | DWZ06_05470 | Not Available | Negative | 1271337 - 1272377 | 39982.4 |
| acylneuraminate cytidylyltransferase family protein | DWZ06_05475 | Not Available | Negative | 1272383 - 1273078 | 25965.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

