Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ06_05370 | Not Available | Negative | 1253767 - 1254057 | 11784.2 |
| hypothetical protein | DWZ06_05375 | Not Available | Negative | 1254180 - 1254425 | 9365.23 |
| hypothetical protein | DWZ06_05380 | Not Available | Negative | 1254545 - 1255366 | 31234.3 |
| glycosyltransferase | DWZ06_05385 | Not Available | Negative | 1255359 - 1256102 | 28851.1 |
| cupin domain-containing protein | DWZ06_05390 | Not Available | Negative | 1256099 - 1256437 | 12434.1 |
| nad-dependent epimerase/dehydratase family protein | DWZ06_05395 | Not Available | Negative | 1256425 - 1257435 | 37375.0 |
| hypothetical protein | DWZ06_05405 | Not Available | Negative | 1258847 - 1260055 | 47313.4 |
| hypothetical protein | DWZ06_05410 | Not Available | Negative | 1260052 - 1261059 | 39552.9 |
| hypothetical protein | DWZ06_05415 | Not Available | Negative | 1261309 - 1262727 | 54501.1 |
| tigr00180 family glycosyltransferase | DWZ06_05420 | Not Available | Negative | 1262732 - 1263658 | 35869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

