Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF29-13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434359 bp
Thymine Count
1406831 bp
Guanine Count
1033248 bp
Cytosine Count
1035378 bp
Genome Length
4910436 bp
Protein-coding Genes
3936 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | DWZ06_05155 | Not Available | Positive | 1205682 - 1206812 | 42012.8 |
| hypothetical protein | DWZ06_05160 | Not Available | Positive | 1206827 - 1207894 | 39911.9 |
| hypothetical protein | DWZ06_05165 | Not Available | Positive | 1207909 - 1208517 | 21868.8 |
| hypothetical protein | DWZ06_05170 | Not Available | Positive | 1208520 - 1209098 | 21924.0 |
| hypothetical protein | DWZ06_05175 | Not Available | Positive | 1209132 - 1210319 | 44944.6 |
| hypothetical protein | DWZ06_05180 | Not Available | Positive | 1210342 - 1210800 | 17370.0 |
| hypothetical protein | DWZ06_05190 | Not Available | Positive | 1214499 - 1214792 | 11069.3 |
| hypothetical protein | DWZ06_05195 | Not Available | Positive | 1214773 - 1215192 | 16306.8 |
| hypothetical protein | DWZ06_05200 | Not Available | Positive | 1215209 - 1215766 | 20144.5 |
| hypothetical protein | DWZ06_05205 | Not Available | Positive | 1216117 - 1216365 | 9429.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

