Dorea formicigenerans strain AF31-13BH

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain AF31-13BH is a gram-positive, anaerobic bacterium primarily found in the gut of Homo sapiens. This strain is characterized by the presence of flagella, which may aid in motility within the intestinal environment. Dorea formicigenerans has a single replicon, indicating a streamlined genomic organization. As a member of the gut microbiota, Dorea formicigenerans potentially plays a role in the digestive processes of its host. The anaerobic nature of this bacterium suggests that it thrives in low-oxygen environments, which is consistent with its habitat within the human gut. The ability to survive and proliferate in such conditions is essential for maintaining the balance of gut microbiota, contributing to various metabolic processes and overall gut health. The accession number QRQQ00000000.1 provides a reference for genomic data, which could be utilized for further studies on its metabolic pathways and interactions with other gut microorganisms. Understanding the specific role of Dorea formicigenerans in the human gut ecosystem may offer insights into its contributions to health and disease, as gut microbiota composition is increasingly recognized as a factor in metabolic disorders and other health conditions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain AF31-13BH

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain AF31-13BH AF31-13BH.Scaf34, whole

Gene Summary

Adenine Count

952435 bp

Thymine Count

986646 bp

Guanine Count

640351 bp

Cytosine Count

689751 bp

Genome Length

3269529 bp

Protein-coding Genes

2940 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Virulence-associated e domain-containing proteinDWZ24_07895Not AvailablePositive1629994 - 163027510670.6
TransposaseDWZ24_07900Not AvailableNegative1630603 - 163092912752.2
mate family efflux transporterDWZ24_07905Not AvailablePositive1631047 - 163236947185.1
Arac family transcriptional regulatorDWZ24_07910Not AvailablePositive1632378 - 163324733714.4
Lactose operon repressorDWZ24_07915Not AvailableNegative1633376 - 163376814156.0
hypotheticalDWZ24_07920Not AvailablePositive1633777 - 163404910678.6
tnpv proteinDWZ24_07925Not AvailablePositive1634054 - 163441914396.7
Transcriptional regulator, merr familyDWZ24_07930Not AvailablePositive1634449 - 163509224987.7
Putative prophage repressor proteinDWZ24_07935Not AvailablePositive1635255 - 163631040328.5
type ii toxin-antitoxin system prevent-host-death family antitoxinDWZ24_07940Not AvailablePositive1636437 - 16366859437.33

Displaying genes 81 – 90 of 3053 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.