Dorea formicigenerans strain AF31-13BH

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain AF31-13BH is a gram-positive, anaerobic bacterium primarily found in the gut of Homo sapiens. This strain is characterized by the presence of flagella, which may aid in motility within the intestinal environment. Dorea formicigenerans has a single replicon, indicating a streamlined genomic organization. As a member of the gut microbiota, Dorea formicigenerans potentially plays a role in the digestive processes of its host. The anaerobic nature of this bacterium suggests that it thrives in low-oxygen environments, which is consistent with its habitat within the human gut. The ability to survive and proliferate in such conditions is essential for maintaining the balance of gut microbiota, contributing to various metabolic processes and overall gut health. The accession number QRQQ00000000.1 provides a reference for genomic data, which could be utilized for further studies on its metabolic pathways and interactions with other gut microorganisms. Understanding the specific role of Dorea formicigenerans in the human gut ecosystem may offer insights into its contributions to health and disease, as gut microbiota composition is increasingly recognized as a factor in metabolic disorders and other health conditions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain AF31-13BH

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain AF31-13BH AF31-13BH.Scaf34, whole

Gene Summary

Adenine Count

952435 bp

Thymine Count

986646 bp

Guanine Count

640351 bp

Cytosine Count

689751 bp

Genome Length

3269529 bp

Protein-coding Genes

2940 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter permeaseDWZ24_02560Not AvailableNegative509612 - 51044531348.2
sugar abc transporter permeaseDWZ24_02565Not AvailableNegative510447 - 51132232504.8
sugar abc transporter substrate-binding proteinDWZ24_02570Not AvailableNegative511418 - 51270747347.2
tetr/acrr family transcriptional regulatorDWZ24_02575Not AvailableNegative513014 - 51360122929.7
yhge/pip domain-containing proteinDWZ24_02580Not AvailablePositive513815 - 51634991989.5
yhge/pip domain-containing proteinDWZ24_02585Not AvailablePositive516352 - 51853577455.9
glycoside hydrolase family 2DWZ24_02590Not AvailableNegative518637 - 52050573090.7
site-specific integraseDWZ24_02595Not AvailablePositive520834 - 52189840983.0
xre family transcriptional regulatorDWZ24_02600Not AvailableNegative522450 - 52324730446.4
hypothetical proteinDWZ24_02610Not AvailablePositive524610 - 52634068268.2

Displaying genes 551 – 560 of 3053 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.