Bacteroides stercoris strain AF35-20

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides stercoris strain AF35-20 is a Gram-negative, anaerobic bacterium belonging to the gut microbiota of Homo sapiens. This strain exhibits a rod shape and possesses flagella, which may facilitate its movement within the gut environment. It is primarily found in feces, indicating its role in the intestinal ecosystem. The strain has been characterized by having one replicon, which is significant for its genetic stability and adaptability within the host's gut environment. Bacteroides species, including B. stercoris, are known for their ability to break down complex carbohydrates and play a crucial role in the fermentation processes that contribute to gut health. The presence of B. stercoris in the gut microbiota highlights its potential importance in maintaining a balanced microbial community. This species can influence host metabolism and may interact with other gut microbes, affecting overall gut function and health. Understanding the specific traits of B. stercoris strain AF35-20 can provide insights into its ecological role and contributions to the gut microbiome, particularly in relation to human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides stercoris
Strainstrain AF35-20

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides stercoris strain AF35-20
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides stercoris strain AF35-20 AF35-20.Scaf60, whole genome

Gene Summary

Adenine Count

1100073 bp

Thymine Count

1042930 bp

Guanine Count

896173 bp

Cytosine Count

950008 bp

Genome Length

3989490 bp

Protein-coding Genes

3298 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4458 domain-containing proteinDWZ78_12370Not AvailableNegative2869684 - 2872353100401.0
duf5003 domain-containing proteinDWZ78_12375Not AvailableNegative2872386 - 287399659730.5
duf4984 domain-containing proteinDWZ78_12380Not AvailableNegative2874027 - 287497435524.0
ragb/susd family nutrient uptake outer membrane proteinDWZ78_12385Not AvailableNegative2875011 - 287651657664.7
tonb-dependent receptorDWZ78_12390Not AvailableNegative2876544 - 2879477110205.0
radical sam proteinDWZ78_12395Not AvailableNegative2880170 - 288094328802.6
helix-hairpin-helix domain-containing proteinDWZ78_12400Not AvailableNegative2881082 - 288310677607.5
duf4294 domain-containing proteinDWZ78_12405Not AvailablePositive2883204 - 288383624153.9
duf5131 family proteinDWZ78_12410Not AvailableNegative2883850 - 288458728526.2
trmh family rna methyltransferaseDWZ78_12415Not AvailableNegative2884729 - 288525919867.9

Displaying genes 2431 – 2440 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Enteric malnutritionCausesPMC8542975

Displaying health effects 1 – 1 of 1 in total