Bacteroides stercoris strain AF35-20

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides stercoris strain AF35-20 is a Gram-negative, anaerobic bacterium belonging to the gut microbiota of Homo sapiens. This strain exhibits a rod shape and possesses flagella, which may facilitate its movement within the gut environment. It is primarily found in feces, indicating its role in the intestinal ecosystem. The strain has been characterized by having one replicon, which is significant for its genetic stability and adaptability within the host's gut environment. Bacteroides species, including B. stercoris, are known for their ability to break down complex carbohydrates and play a crucial role in the fermentation processes that contribute to gut health. The presence of B. stercoris in the gut microbiota highlights its potential importance in maintaining a balanced microbial community. This species can influence host metabolism and may interact with other gut microbes, affecting overall gut function and health. Understanding the specific traits of B. stercoris strain AF35-20 can provide insights into its ecological role and contributions to the gut microbiome, particularly in relation to human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides stercoris
Strainstrain AF35-20

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides stercoris strain AF35-20
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides stercoris strain AF35-20 AF35-20.Scaf60, whole genome

Gene Summary

Adenine Count

1100073 bp

Thymine Count

1042930 bp

Guanine Count

896173 bp

Cytosine Count

950008 bp

Genome Length

3989490 bp

Protein-coding Genes

3298 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterDWZ78_06620Not AvailableNegative1555478 - 155704057345.3
cys-trna(pro) deacylaseDWZ78_06625Not AvailableNegative1557271 - 155775918119.3
excinuclease abc subunit uvraDWZ78_06630Not AvailableNegative1557857 - 1560685105520.0
lysm peptidoglycan-binding domain-containing proteinDWZ78_06635Not AvailablePositive1560870 - 156267267626.7
port family proteinDWZ78_06640Not AvailablePositive1562721 - 156340725629.3
duf4293 family proteinDWZ78_06645Not AvailableNegative1563525 - 156398317025.8
rna polymerase rpb6DWZ78_06650Not AvailableNegative1563983 - 156431813009.3
outer membrane protein assembly factor bamdDWZ78_06655Not AvailableNegative1564369 - 156517231141.1
amino acid-binding proteinDWZ78_06660Not AvailableNegative1565316 - 156574115410.7
phenylacetate--coa ligaseDWZ78_06665Not AvailableNegative1565761 - 156705948648.6

Displaying genes 1331 – 1340 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Enteric malnutritionCausesPMC8542975

Displaying health effects 1 – 1 of 1 in total