Segatella copri strain AF38-11

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri strain AF38-11 is a Gram-negative anaerobic bacterium predominantly found in the gut microbiome. As an anaerobe, this strain thrives in oxygen-depleted environments, which is characteristic of the gastrointestinal tract where it resides. The gut serves as a complex habitat that supports a diverse array of microbial communities, and Segatella copri strain AF38-11 contributes to this ecological niche. The specific physiological and metabolic capabilities of Segatella copri strain AF38-11 remain to be fully elucidated; however, its presence within the gut microbiome suggests potential roles in digestion, nutrient absorption, and host-microbe interactions. The bacterium's Gram-negative status indicates a unique cell wall structure that may influence its interactions with other microbial species within the gut and the host's immune system. Understanding the traits of Segatella copri strain AF38-11 could provide insights into its functional contributions to gut health and its potential influence on the overall composition of the gut microbiota. Given the intricate relationships between gut bacteria and host physiology, further investigation into this strain may reveal its ecological significance in maintaining microbial diversity and supporting gastrointestinal function.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain AF38-11

Accession NumberQROP00000000.1

Gene Summary

Adenine Count

1003111 bp

Thymine Count

1024665 bp

Guanine Count

834115 bp

Cytosine Count

823133 bp

Genome Length

3686043 bp

Protein-coding Genes

2868 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinDW026_00005Not Available-82 - 73222862.2
pectin esteraseDW026_00010Not Available+1027 - 3951105576.0
tonb-dependent receptorDW026_00015Not Available+4385 - 7633119109.0
ragb/susd family nutrient uptake outer membrane proteinDW026_00020Not Available+7654 - 959772022.0
duf5123 domain-containing proteinDW026_00025Not Available+9581 - 1131462587.2
rpn family recombination-promoting nuclease/putative transposaseDW026_00030Not Available+11484 - 1234433851.6
hypothetical proteinDW026_00035Not Available+12400 - 1268711040.3
tonb-dependent receptorDW026_00040Not Available+13430 - 16705121703.0
ragb/susd family nutrient uptake outer membrane proteinDW026_00045Not Available+16756 - 1846563300.8
hypothetical proteinDW026_00050Not Available+18710 - 2069572288.3

Displaying genes 1 – 10 of 2941 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites