Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AF39-11
Accession NumberQROI00000000.1
Gene Summary
Adenine Count
1032276 bp
Thymine Count
1042933 bp
Guanine Count
824714 bp
Cytosine Count
828950 bp
Genome Length
3729283 bp
Protein-coding Genes
3024 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1_nc_021804: hypothetical protein | DW035_01190 | Not Available | + | 298149 - 298577 | 16563.8 |
| 1_nc_021804: hypothetical protein | DW035_01195 | Not Available | + | 298607 - 299365 | 28475.9 |
| Replisome organizer | DW035_01200 | Not Available | + | 299427 - 300209 | 29968.9 |
| Dna replication protein dnac | DW035_01205 | Not Available | + | 300244 - 300789 | 20952.2 |
| 2_nc_021806: nucleoside triphosphate pyrophosphohydrolase, mazg | DW035_01210 | Not Available | + | 300786 - 301349 | 22327.4 |
| Putative dna n-6-adenine-methyltransferase | DW035_01215 | Not Available | + | 301369 - 301860 | 18583.1 |
| hypothetical protein | DW035_01220 | Not Available | + | 301862 - 302317 | 17640.0 |
| Hypothetical protein | DW035_01225 | Not Available | + | 302636 - 303448 | 31105.5 |
| Exonuclease | DW035_01230 | Not Available | + | 303445 - 304017 | 21681.9 |
| hypothetical protein | DW035_01235 | Not Available | + | 304022 - 304414 | 14995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
